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Publications

A Putative long-range RNA-RNA interaction between ORF8 and Spike of SARS-CoV-2.
Omoru OB, Pereira F, Janga SC, Manzourolajdad A. (2022)
PLoS One. pii: PONE-D-21-35236.doi: 10.1371/journal.pone.0260331

FOXP3 exon 2 controls Treg stability and autoimmunity.
Du J, Wang Q, Yang S, Chen S, Fu Y, Spath S, Domeier P, Hagin D, Anover-Sombke S, Haouili M, Liu S, Wan J, Han L, Liu J, Yang L, Sangani N, Li Y, Lu X, Janga SC, Kaplan MH, Torgerson TR, Ziegler SF, Zhou B. (2022 Jun 24)
Sci Immunol.doi: 10.1126/sciimmunol.abo5407

CASowary: CRISPR-Cas13 guide RNA predictor for transcript depletion.
Krohannon A, Srivastava M, Rauch S, Srivastava R, Dickinson BC, Janga SC. (2022 Mar 2)
BMC Genomics. pii: 10.1186/s12864-022-08366-2.doi: 10.1186/s12864-022-08366-2

Penguin: A tool for predicting pseudouridine sites in direct RNA nanopore sequencing data.
Hassan D, Acevedo D, Daulatabad SV, Mir Q, Janga SC. (2022 Jul)
Methods. pii: S1046-2023(22)00035-4.doi: 10.1016/j.ymeth.2022.02.005

Esophageal Microbiome in Healthy Children and Esophageal Eosinophilia.
Parashette KR, Sarsani VK, Toh E, Janga SC, Nelson DE, Gupta SK. (2022 May 1)
J Pediatr Gastroenterol Nutr. pii: 00005176-202205000-00015.doi: 10.1097/MPG.0000000000003413

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