Lantern: A genome-scale lncRNA ontology annotation extractor and cellular network repository

Lantern is a repository of high quality controlled lncRNA ontology annotations, extracted by mining recent lncRNA literature using a robust NLP based approach. It also houses extensive lncRNA omics annotations like: tissue specific lncRNA expression, RBP interactions, lncRNA-protein co-expression, coding potential, sub-cellular localization and SNPs in lncRNA. Thereby making it a holistic resource for improving the understanding of the noncoding transcriptome. The extracted annotations for around 11,000 lncRNAs are available at

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Posted in Softwares

Contact

School of Informatics and Computing
Walker Plaza Building
719 Indiana Ave Ste 319
Indianapolis,
Indiana 46202, USA
email: jangalab@iupui.edu
phone: +1-317-278-4147
fax: +1-317-278-9201

News

Sarath Janga has been named as a standing member of NIH’s Molecular Neurogenetics Study Section

The National Institutes of Health has selected Associate Professor Sarath... Read more →

Lab student among Elite 50 of IUPUI

Janga lab graduate PhD student in Bioinformatics, Swapna Vidhur Daulatabad... Read more →

Grant for research on diabetic retinopathy

Janga lab received $25K pilot AI grant from IUPUI AI... Read more →

Indo-U.S. Virtual Networks for COVID-19

Dr. Janga’s lab received the Indo-US covid19 grant to support... Read more →